OK so the scale is set correctly
so have REaligned as im say ?!?!
so now try recon with this settings
go to RECONSTRUCTION=SETTINGS=DEPHT MAP CALCULATIONS= NORMAL MODEL=IMAGE DOWNSCALE and change from 2 to say 3-4
so get much faster recon but not forget to set BACK when finished experimentation !!! 
so get much faster model reconstructed for testing purposes
If still have issues can take a look on your PC and see if the workflows is correct, because it look something is not done as it should…
you live in what time zone ? i in CET +1 ( WIEN-BRATISLAVA )