The values for Pawn, HUD, Player Controller and GameState will not save. This problem has persisted across several of my projects. I change these values in the menu below, then save all. Close and re-open and the values are reset to as they were before they were changed.
Thank you for reporting this issue to us. I have replicated the issue in-house and have submitted a bug report to our developers. If for any reason you need to reference this report in the future, please refer to: UE-13984
For the record, as long as the settings were manually changed and I build the executable like this fashion, no problem should occur correct? because this same issue is happening to me